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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_051059.1 RefSeqGene
- Range
-
5001..23449
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001199823.3 → NP_001186752.1 NEDD8-MDP1 protein isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the allele encoded by the GRCh38 reference genome and encodes isoform (1).
- Source sequence(s)
-
AL096870, DN993851
- UniProtKB/TrEMBL
-
E9PL57
- Related
- ENSP00000431482.1, ENST00000534348.5
- Conserved Domains (3) summary
-
- smart00213
Location:1 → 50
- UBQ; Ubiquitin homologues
- pfam12689
Location:51 → 177
- Acid_PPase; Acid Phosphatase
- cl00155
Location:1 → 51
- UBQ; Ubiquitin-like proteins
-
NM_001412116.1 → NP_001399045.1 NEDD8-MDP1 protein isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) uses the same exon combination as variant 1 but represents the allele encoded by the T2T-CHM13v2.0 genome assembly. The encoded isoform (2) has a shorter C-terminus compared to isoform 1.
- Source sequence(s)
-
CP068264
- UniProtKB/TrEMBL
-
E9PL57
RNA
-
NR_137630.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL096870, CB070148
-
NR_137631.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL096870, FY211956
-
NR_137632.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL096870, FY212610
- Related
-
ENST00000604306.1
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000014.9 Reference GRCh38.p14 Primary Assembly
- Range
-
24213943..24232367 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 PATCHES
Genomic
-
NW_018654722.1 Reference GRCh38.p14 PATCHES
- Range
-
514921..533345 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060938.1 Alternate T2T-CHM13v2.0
- Range
-
18412319..18430739 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)