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si:dkey-112a7.5 si:dkey-112a7.5 [ Danio rerio (zebrafish) ]

Gene ID: 100536854, updated on 12-Sep-2024

Summary

Official Symbol
si:dkey-112a7.5provided by ZNC
Official Full Name
si:dkey-112a7.5provided by ZNC
Primary source
ZFIN:ZDB-GENE-141216-460
See related
Ensembl:ENSDARG00000100550 AllianceGenome:ZFIN:ZDB-GENE-141216-460
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

See si:dkey-112a7.5 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (22637558..22639372)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (22366363..22368217)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene claudin 7a Neighboring gene si:dkey-112a7.4 Neighboring gene plac8 onzin related protein 5 Neighboring gene uncharacterized LOC137496093

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
uncharacterized protein LOC100536854

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001386806.1NP_001373735.1  uncharacterized protein LOC100536854 precursor

    Status: VALIDATED

    Source sequence(s)
    BX649313
    Related
    ENSDARP00000134899.1, ENSDART00000158698.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    22637558..22639372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394687.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    300095..301909
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395264.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    316371..318170
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)