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ATP6V0E1P4 ATPase H+ transporting V0 subunit e1 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 100874504, updated on 17-Sep-2024

Summary

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Official Symbol
ATP6V0E1P4provided by HGNC
Official Full Name
ATPase H+ transporting V0 subunit e1 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:41938
See related
Ensembl:ENSG00000227883 AllianceGenome:HGNC:41938
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See ATP6V0E1P4 in Genome Data Viewer
Location:
1p33
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (47550196..47550750)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (47428663..47429215)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (48015868..48016422)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ReSE screen-validated silencer GRCh37_chr1:47968760-47968930 Neighboring gene uncharacterized LOC124904173 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 859 Neighboring gene ribosomal protein L21 pseudogene 24 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:48002646-48003146 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:48030134-48030712 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:48032789-48033289 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:48056158-48056698 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:48108761-48109316 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:48152512-48153200 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:48153201-48153889 Neighboring gene uncharacterized LOC124904174 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:48173729-48174695 Neighboring gene long intergenic non-protein coding RNA 1738 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 860 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:48176482-48176982 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:48190497-48191064 Neighboring gene Sharpr-MPRA regulatory region 13425 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:48240987-48241521 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:48251591-48252091 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:48259887-48260120 Neighboring gene TraB domain containing 2B Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_8222 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:48347328-48347854 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:48347855-48348380 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:48360287-48361284 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:48362752-48363252 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:48363755-48364280 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_8235 Neighboring gene Sharpr-MPRA regulatory region 2886 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_8236 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:48399564-48400079 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_8247

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 pseudogene 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032380.1 

    Range
    101..655
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    47550196..47550750
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    47428663..47429215
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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