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LOC100911728 40S ribosomal protein S27-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 100911728, updated on 17-Aug-2024

Summary

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Symbol
LOC100911728provided by RGD
Full Name
40S ribosomal protein S27-likeprovided by RGD
Primary source
RGD:6491355
See related
AllianceGenome:RGD:6491355
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
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Genomic context

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Location:
13q24
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (85615534..85615834)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (83082817..83083112)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (89218844..89219219)

Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene olfactomedin-like 2B Neighboring gene activating transcription factor 6 Neighboring gene U6 spliceosomal RNA Neighboring gene ferritin light chain 1-like Neighboring gene DNA methyltransferase 3B, pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
  
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
  
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
small ribosomal subunit protein eS27-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086031.1 Reference GRCr8

    Range
    85615534..85615834
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003751271.6 → XP_003751319.1  small ribosomal subunit protein eS27-like

    See identical proteins and their annotated locations for XP_003751319.1

    UniProtKB/TrEMBL
    A0A8I6A2I7, A0A8L2QXZ3
    Conserved Domains (1) summary
    PLN00209
    Location:6 → 77
    PLN00209; ribosomal protein S27; Provisional
Nucleotide Protein Strain
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