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Sec61bl SEC61 translocon subunit beta like [ Mus musculus (house mouse) ]

Gene ID: 101055909, updated on 11-Apr-2024

Summary

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Official Symbol
Sec61blprovided by MGI
Official Full Name
SEC61 translocon subunit beta likeprovided by MGI
Primary source
MGI:MGI:3642323
See related
AllianceGenome:MGI:3642323
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm10320
Summary
Predicted to be involved in SRP-dependent cotranslational protein targeting to membrane, translocation and posttranslational protein targeting to membrane, translocation. Predicted to be part of Sec61 translocon complex. Predicted to be active in membrane. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See Sec61bl in Genome Data Viewer
Location:
13 D1; 13 52.06 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (98625867..98626349, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (98489533..98489841, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene STARR-seq mESC enhancer starr_35422 Neighboring gene RIKEN cDNA 2310005E17 gene Neighboring gene predicted gene, 46437 Neighboring gene predicted gene, 52050 Neighboring gene STARR-seq mESC enhancer starr_35424 Neighboring gene STARR-positive B cell enhancer mm9_chr13:99265550-99265851 Neighboring gene STARR-seq mESC enhancer starr_35425 Neighboring gene predicted gene, 41032 Neighboring gene STARR-seq mESC enhancer starr_35427 Neighboring gene predicted gene, 41033 Neighboring gene predicted gene, 48049

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables epidermal growth factor binding ISO
Inferred from Sequence Orthology
more info
  
enables guanyl-nucleotide exchange factor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables ribosome binding ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in ERAD pathway ISO
Inferred from Sequence Orthology
more info
  
involved_in SRP-dependent cotranslational protein targeting to membrane, translocation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in post-translational protein targeting to membrane, translocation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in retrograde protein transport, ER to cytosol ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
part_of Sec61 translocon complex IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
  
located_in endoplasmic reticulum membrane ISO
Inferred from Sequence Orthology
more info
  
located_in endoplasmic reticulum quality control compartment ISO
Inferred from Sequence Orthology
more info
  
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
protein transport protein Sec61 subunit beta-like
Names
predicted pseudogene 10320
protein transport protein Sec61 subunit beta pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    98625867..98626349 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036158243.1 → XP_036014136.1  protein transport protein Sec61 subunit beta-like

    Conserved Domains (1) summary
    pfam03911
    Location:60 → 97
    Sec61_beta; Sec61beta family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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