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PCBP2P1 PCBP2 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 101060045, updated on 17-Jun-2024

Summary

Official Symbol
PCBP2P1provided by HGNC
Official Full Name
PCBP2 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:8649
See related
AllianceGenome:HGNC:8649
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Annotation information
Note: This locus, originally represented by GeneID:54040, was annotated on the wrong strand in build GRCh37.p10 (Annotation Release 104). GeneID:54040 was discontinued and replaced by GeneID:101060045 on the correct strand. [17 Jun 2014]
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Genomic context

See PCBP2P1 in Genome Data Viewer
Location:
21q22.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (39170283..39172368, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (37554851..37556937, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (40542209..40544294, complement)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2943 Neighboring gene Sharpr-MPRA regulatory region 7751 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:40434218-40434800 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr21:40447061-40447847 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13318 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:40509167-40510074 Neighboring gene ribosomal protein L23a pseudogene 12 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr21:40529419-40530214 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13319 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13320 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18466 Neighboring gene proteasome assembly chaperone 1 Neighboring gene bromodomain and WD repeat domain containing 1 Neighboring gene TIMM9 pseudogene 2

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033131.2 

    Range
    101..2186
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    39170283..39172368 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060945.1 Alternate T2T-CHM13v2.0

    Range
    37554851..37556937 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)