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fabp7b fatty acid binding protein 7, brain, b [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 101268926, updated on 8-Mar-2024

Summary

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Gene symbol
fabp7b
Gene description
fatty acid binding protein 7, brain, b
See related
Ensembl:ENSOMYG00000000321
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
fabp7
Orthologs
human zebrafish all
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Genomic context

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See fabp7b in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 4 NC_048568.1 (16435491..16436802, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 4 NC_035080.1 (59189390..59190701, complement)

Chromosome 4 - NC_048568.1Genomic Context describing neighboring genes Neighboring gene sphingomyelin phosphodiesterase acid like 3A Neighboring gene uncharacterized LOC110522197 Neighboring gene protein kinase (cAMP-dependent, catalytic) inhibitor beta Neighboring gene serine incorporator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates. Berthelot C, et al. Nat Commun, 2014 Apr 22. PMID 24755649, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fatty acid binding protein 7, brain, b
Names
fatty acid binding protein 7
fatty acid-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001281342.1 → NP_001268271.1  fatty acid binding protein 7, brain, b

    See identical proteins and their annotated locations for NP_001268271.1

    Status: PROVISIONAL

    Source sequence(s)
    JN413683
    UniProtKB/TrEMBL
    G9HXN8
    Related
    ENSOMYP00000000454.1, ENSOMYT00000000548.2
    Conserved Domains (1) summary
    pfam00061
    Location:8 → 132
    Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048568.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    16435491..16436802 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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