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LOC101927262 uncharacterized LOC101927262 [ Homo sapiens (human) ]

Gene ID: 101927262, updated on 17-Jun-2024

Summary

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Gene symbol
LOC101927262
Gene description
uncharacterized LOC101927262
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in adrenal (RPKM 3.7), testis (RPKM 1.1) and 10 other tissues See more
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Genomic context

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See LOC101927262 in Genome Data Viewer
Location:
2p25.3
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (285929..296831)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene SH3 and SYLF domain containing 1 Neighboring gene MPRA-validated peak3578 silencer Neighboring gene MPRA-validated peak3579 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11098 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11099 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15215 Neighboring gene acid phosphatase 1 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:284666-285865 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11100 Neighboring gene uncharacterized LOC105373346 Neighboring gene ALK and LTK ligand 2 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:309367-310259 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:314675-315244 Neighboring gene long intergenic non-protein coding RNA 1865 Neighboring gene uncharacterized LOC105373351 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:373572-374771

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000002.12 Chromosome 2 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Potential readthrough

Included gene: ACP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    285929..296831
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007085889.1 RNA Sequence

  2. XR_007085917.1 RNA Sequence

  3. XR_007085954.1 RNA Sequence

  4. XR_007085938.1 RNA Sequence

  5. XR_007085960.1 RNA Sequence

  6. XR_007085903.1 RNA Sequence

  7. XR_007085926.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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