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LINC01831 long intergenic non-protein coding RNA 1831 [ Homo sapiens (human) ]

Gene ID: 101927331, updated on 17-Sep-2024

Summary

Official Symbol
LINC01831provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1831provided by HGNC
Primary source
HGNC:HGNC:52637
See related
Ensembl:ENSG00000225765 AllianceGenome:HGNC:52637
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward liver (RPKM 3.8) See more
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Genomic context

See LINC01831 in Genome Data Viewer
Location:
2q12.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (104412152..104414031, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (104871965..104873844, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (105028610..105030489, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100287010 Neighboring gene uncharacterized LOC124908058 Neighboring gene adenosylhomocysteinase pseudogene 3 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:105031348-105032186 Neighboring gene VISTA enhancer hs1131 Neighboring gene VISTA enhancer hs1534 Neighboring gene long intergenic non-protein coding RNA 1102 Neighboring gene long intergenic non-protein coding RNA 1103 Neighboring gene VISTA enhancer hs702 Neighboring gene small nucleolar RNA U3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_135589.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC068535, BC014368
    Related
    ENST00000449772.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    104412152..104414031 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    104871965..104873844 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)