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DPP10-AS3 DPP10 antisense RNA 3 [ Homo sapiens (human) ]

Gene ID: 101927591, updated on 10-Dec-2024

Summary

Official Symbol
DPP10-AS3provided by HGNC
Official Full Name
DPP10 antisense RNA 3provided by HGNC
Primary source
HGNC:HGNC:40939
See related
Ensembl:ENSG00000231538 AllianceGenome:HGNC:40939
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.9) See more
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Genomic context

See DPP10-AS3 in Genome Data Viewer
Location:
2q14.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (114828341..114833548, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (115253727..115258929, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (115585918..115591125, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene RNA, U2 small nuclear 41, pseudogene Neighboring gene uncharacterized LOC124907877 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:115312469-115312655 Neighboring gene dipeptidyl peptidase like 10 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:115409386-115410190 Neighboring gene NANOG hESC enhancer GRCh37_chr2:115527347-115527874 Neighboring gene NANOG hESC enhancer GRCh37_chr2:115578660-115579193 Neighboring gene uncharacterized LOC105373575 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:115843289-115844136 Neighboring gene uncharacterized LOC105373574

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Phenotypes

EBI GWAS Catalog

Description
Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_132105.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC033566, HY010208, HY194418
    Related
    ENST00000417844.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    114828341..114833548 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    115253727..115258929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)