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LOC101927769 uncharacterized LOC101927769 [ Homo sapiens (human) ]

Gene ID: 101927769, updated on 10-Dec-2024

Summary

Gene symbol
LOC101927769
Gene description
uncharacterized LOC101927769
See related
Ensembl:ENSG00000226097
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC101927769 in Genome Data Viewer
Location:
7p21.1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (20296708..20311712)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (20431666..20446657)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (20336331..20351335)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene MACC1 antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17988 Neighboring gene MET transcriptional regulator MACC1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25686 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25687 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25688 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:20256832-20258031 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:20259517-20260046 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17989 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25691 Neighboring gene glutamine insufficiency regulator of glutaminase lncRNA Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25692 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:20369144-20369756 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25693 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25694 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17990 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17991 Neighboring gene ITGB8 antisense RNA 1 Neighboring gene integrin subunit beta 8 Neighboring gene small nucleolar RNA SNORD56

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110117.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK026386, BX091547
    Related
    ENST00000446399.6

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    20296708..20311712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    20431666..20446657
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)