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LOC101928201 uncharacterized LOC101928201 [ Homo sapiens (human) ]

Gene ID: 101928201, updated on 17-Sep-2024

Summary

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Gene symbol
LOC101928201
Gene description
uncharacterized LOC101928201
See related
Ensembl:ENSG00000236513
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC101928201 in Genome Data Viewer
Location:
Xp22.32
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (4627200..4633572, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (4171767..4178139, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (4545241..4551613, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 239 member C Neighboring gene RPL24 pseudogene 9 Neighboring gene NANOG hESC enhancer GRCh37_chrX:4139581-4140146 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:4174729-4175230 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:4175231-4175730 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:4203631-4203806 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:4300102-4300943 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:4393267-4393845 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chrX:4463784-4464983 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:4628486-4629685 Neighboring gene NANOG hESC enhancer GRCh37_chrX:4722126-4722632 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:4809466-4809972 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chrX:4872887-4874086 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chrX:4969484-4970683 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:5073162-5073812 Neighboring gene MT-ND6 pseudogene 12 Neighboring gene MT-CYB pseudogene 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110390.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC074035, BC038195
    Related
    ENST00000420725.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    4627200..4633572 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    4171767..4178139 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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