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LOC101928529 uncharacterized LOC101928529 [ Homo sapiens (human) ]

Gene ID: 101928529, updated on 10-Dec-2024

Summary

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Gene symbol
LOC101928529
Gene description
uncharacterized LOC101928529
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC101928529 in Genome Data Viewer
Location:
3p21.31
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (44477690..44485028)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (44493502..44502628)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 694 Neighboring gene long intergenic non-protein coding RNA 1988 Neighboring gene zinc finger protein 445 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:44482886-44483092 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14263 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14264 Neighboring gene zinc finger protein 852 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:44551492-44552268 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:44552269-44553045 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19765 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19766 Neighboring gene EI24 pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    44477690..44485028
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_940785.4 RNA Sequence

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_009646197.1 Reference GRCh38.p14 PATCHES

    Range
    3039..12167
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_953198.4 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    44493502..44502628
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007073475.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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