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ADGB-DT ADGB divergent transcript [ Homo sapiens (human) ]

Gene ID: 101928661, updated on 10-Dec-2024

Summary

Official Symbol
ADGB-DTprovided by HGNC
Official Full Name
ADGB divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:55654
See related
Ensembl:ENSG00000237468 AllianceGenome:HGNC:55654
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See ADGB-DT in Genome Data Viewer
Location:
6q24.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (146594516..146598931, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (147787738..147792152, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (146915652..146920067, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene glutamate metabotropic receptor 1 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:146678820-146680019 Neighboring gene RNA, 5S ribosomal pseudogene 222 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:146709629-146710828 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17644 Neighboring gene Sharpr-MPRA regulatory region 4102 Neighboring gene RAB32, member RAS oncogene family Neighboring gene uncharacterized LOC124901517 Neighboring gene androglobin Neighboring gene uncharacterized LOC105378040

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Phenotypes

EBI GWAS Catalog

Description
Identification of two new loci at IL23R and RAB32 that influence susceptibility to leprosy.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_125860.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359547
    Related
    ENST00000419168.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    146594516..146598931 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    147787738..147792152 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)