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GABRG3-AS1 GABRG3 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101928869, updated on 17-Sep-2024

Summary

Official Symbol
GABRG3-AS1provided by HGNC
Official Full Name
GABRG3 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40249
See related
Ensembl:ENSG00000228740 AllianceGenome:HGNC:40249
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 13.5) See more
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Genomic context

See GABRG3-AS1 in Genome Data Viewer
Location:
15q12
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (27157735..27161319, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (24899355..24902939, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (27402882..27406466, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene gamma-aminobutyric acid type A receptor subunit gamma3 Neighboring gene uncharacterized LOC124903449 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:27284775-27285276 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:27285277-27285776 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:27297461-27297960 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr15:27302839-27304038 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:27332339-27332839 Neighboring gene uncharacterized LOC107984766 Neighboring gene Sharpr-MPRA regulatory region 5301 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:27438261-27438762 Neighboring gene dual specificity phosphatase 3 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:27471561-27472061 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:27499740-27500244 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:27516499-27516999 Neighboring gene RNA, 5S ribosomal pseudogene 391

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_120343.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA608760, AC136896, DB073112
    Related
    ENST00000439938.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    27157735..27161319 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    24899355..24902939 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)