U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC02119 long intergenic non-protein coding RNA 2119 [ Homo sapiens (human) ]

Gene ID: 101929745, updated on 22-Oct-2024

Summary

Go to the top of the page Help
Official Symbol
LINC02119provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2119provided by HGNC
Primary source
HGNC:HGNC:52975
See related
Ensembl:ENSG00000248587 AllianceGenome:HGNC:52975
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LINC02119 in Genome Data Viewer
Location:
5p13.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (38148480..38153715)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (38397569..38402804)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (38148582..38153817)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2110 Neighboring gene NANOG hESC enhancer GRCh37_chr5:38039572-38040073 Neighboring gene long intergenic non-protein coding RNA 2107 Neighboring gene uncharacterized LOC105374730 Neighboring gene Sharpr-MPRA regulatory region 2046 Neighboring gene peroxiredoxin 4 pseudogene 2 Neighboring gene uncharacterized LOC124900966 Neighboring gene NANOG hESC enhancer GRCh37_chr5:38257291-38257792 Neighboring gene EGF like, fibronectin type III and laminin G domains

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See Variation Viewer (GRCh37.p13)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_134272.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC028978
    Related
    ENST00000508853.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    38148480..38153715
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    38397569..38402804
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials