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TEX51 testis expressed 51 [ Homo sapiens (human) ]

Gene ID: 101929926, updated on 2-Nov-2024

Summary

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Official Symbol
TEX51provided by HGNC
Official Full Name
testis expressed 51provided by HGNC
Primary source
HGNC:HGNC:52387
See related
Ensembl:ENSG00000237524 AllianceGenome:HGNC:52387
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward testis (RPKM 12.6) See more
Orthologs
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Genomic context

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See TEX51 in Genome Data Viewer
Location:
2q14.3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (126898890..126902097)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (127335881..127339100)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (127656466..127659673)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124907882 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:127555119-127556318 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:127585337-127586060 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:127632091-127633290 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11928 Neighboring gene uncharacterized LOC105373603 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:127699803-127700707 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:127728541-127729508 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:127782155-127782754 Neighboring gene uncharacterized LOC105373604 Neighboring gene RNA, U7 small nuclear 182 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

Genotypes

General gene information

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Homology

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
testis-expressed protein 51

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001322244.2 → NP_001309173.1  testis-expressed protein 51 isoform 1 precursor

    Status: VALIDATED

    Source sequence(s)
    AI040972, BI461950, BI828150
    Consensus CDS
    CCDS82507.1
    UniProtKB/Swiss-Prot
    A0A1B0GUA7
    UniProtKB/TrEMBL
    A0A2R8Y5A7
    Related
    ENSP00000489776.1, ENST00000568484.6

  2. NM_001410921.1 → NP_001397850.1  testis-expressed protein 51 isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC114783
    Consensus CDS
    CCDS92856.1
    UniProtKB/TrEMBL
    A0A1B0GUP2
    Related
    ENSP00000490189.1, ENST00000636457.1

  3. NM_001416075.1 → NP_001403004.1  testis-expressed protein 51 isoform 3 precursor

    Status: VALIDATED

    Source sequence(s)
    AC114783

  4. NM_001416076.1 → NP_001403005.1  testis-expressed protein 51 isoform 4 precursor

    Status: VALIDATED

    Source sequence(s)
    AC114783

  5. NM_001416077.1 → NP_001403006.1  testis-expressed protein 51 isoform 5 precursor

    Status: VALIDATED

    Source sequence(s)
    AC114783
    UniProtKB/TrEMBL
    A0A9L9PYI6
    Related
    ENSP00000516664.1, ENST00000706944.1

  6. NM_001416078.1 → NP_001403007.1  testis-expressed protein 51 isoform 6 precursor

    Status: VALIDATED

    Source sequence(s)
    AC114783

  7. NM_001416079.1 → NP_001403008.1  testis-expressed protein 51 isoform 1 precursor

    Status: VALIDATED

    Source sequence(s)
    AC114783
    UniProtKB/Swiss-Prot
    A0A1B0GUA7
    Related
    ENSP00000490030.1, ENST00000450035.5

  8. NM_001416080.1 → NP_001403009.1  testis-expressed protein 51 isoform 8 precursor

    Status: VALIDATED

    Source sequence(s)
    AC114783

  9. NM_001416081.1 → NP_001403010.1  testis-expressed protein 51 isoform 9 precursor

    Status: VALIDATED

    Source sequence(s)
    AC114783

  10. NM_001416082.1 → NP_001403011.1  testis-expressed protein 51 isoform 10 precursor

    Status: VALIDATED

    Source sequence(s)
    AC114783
    UniProtKB/TrEMBL
    A0A9L9PXS2
    Related
    ENSP00000516665.1, ENST00000706945.1

RNA

  1. NR_136239.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AI040972, BI461950, BX113116
    Related
    ENST00000458326.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    126898890..126902097
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011512272.2 → XP_011510574.1  testis-expressed protein 51 isoform X5

    UniProtKB/TrEMBL
    A0A2R8Y5A7

  2. XM_017003148.2 → XP_016858637.1  testis-expressed protein 51 isoform X6

    UniProtKB/TrEMBL
    A0A2R8Y5A7

  3. XM_047442880.1 → XP_047298836.1  testis-expressed protein 51 isoform X4

  4. XM_011512276.2 → XP_011510578.1  testis-expressed protein 51 isoform X8

    See identical proteins and their annotated locations for XP_011510578.1

    UniProtKB/TrEMBL
    A0A2R8Y5A7, A0A9L9PXS2
    Related
    ENSP00000494377.1, ENST00000643416.1

  5. XM_011512269.2 → XP_011510571.1  testis-expressed protein 51 isoform X1

  6. XM_011512278.2 → XP_011510580.1  testis-expressed protein 51 isoform X12

  7. XM_011512273.2 → XP_011510575.1  testis-expressed protein 51 isoform X7

  8. XM_011512270.2 → XP_011510572.1  testis-expressed protein 51 isoform X2

  9. XM_017003149.2 → XP_016858638.1  testis-expressed protein 51 isoform X11

  10. XM_047442885.1 → XP_047298841.1  testis-expressed protein 51 isoform X10

  11. XM_011512279.2 → XP_011510581.1  testis-expressed protein 51 isoform X13

  12. XM_011512271.2 → XP_011510573.1  testis-expressed protein 51 isoform X3

  13. XM_011512277.3 → XP_011510579.1  testis-expressed protein 51 isoform X9

    UniProtKB/TrEMBL
    A0A2R8Y5A7

RNA

  1. XR_001738585.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    127335881..127339100
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054340119.1 → XP_054196094.1  testis-expressed protein 51 isoform X5

  2. XM_054340120.1 → XP_054196095.1  testis-expressed protein 51 isoform X6

  3. XM_054340118.1 → XP_054196093.1  testis-expressed protein 51 isoform X4

  4. XM_054340122.1 → XP_054196097.1  testis-expressed protein 51 isoform X8

    UniProtKB/TrEMBL
    A0A9L9PXS2

  5. XM_054340115.1 → XP_054196090.1  testis-expressed protein 51 isoform X1

  6. XM_054340126.1 → XP_054196101.1  testis-expressed protein 51 isoform X12

  7. XM_054340121.1 → XP_054196096.1  testis-expressed protein 51 isoform X7

  8. XM_054340116.1 → XP_054196091.1  testis-expressed protein 51 isoform X2

  9. XM_054340125.1 → XP_054196100.1  testis-expressed protein 51 isoform X11

  10. XM_054340124.1 → XP_054196099.1  testis-expressed protein 51 isoform X10

  11. XM_054340127.1 → XP_054196102.1  testis-expressed protein 51 isoform X13

  12. XM_054340123.1 → XP_054196098.1  testis-expressed protein 51 isoform X9

  13. XM_054340117.1 → XP_054196092.1  testis-expressed protein 51 isoform X3

RNA

  1. XR_008486251.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A1B0GUA7.1 GenPept UniProtKB/Swiss-Prot:A0A1B0GUA7

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