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LOC101929974 uncharacterized LOC101929974 [ Homo sapiens (human) ]

Gene ID: 101929974, updated on 12-Sep-2024

Summary

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Gene symbol
LOC101929974
Gene description
uncharacterized LOC101929974
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
12q24.33
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (131452980..131529874, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (131495121..131573135, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (131937525..132014419, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131832905-131833449 Neighboring gene long intergenic non-protein coding RNA 2370 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131865091-131865672 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:131876192-131876341 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:131885230-131885407 Neighboring gene vegetative cell wall protein gp1-like Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131914223-131914746 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131917517-131918230 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131925817-131926316 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7361 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131939217-131939722 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7362 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7363 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:132012597-132013096 Neighboring gene uncharacterized LOC124903056 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:132020834-132021416 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr12:132036943-132037561 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:132040696-132041196 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:132041197-132041697 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:132044895-132045396 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:132045397-132045896 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:132051425-132051924 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:132059886-132060461 Neighboring gene uncharacterized LOC105370084

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

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NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_187798.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC073578

  2. NR_187799.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC073578

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    131452980..131529874 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    131495121..131573135 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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