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Gm29942 predicted gene, 29942 [ Mus musculus (house mouse) ]

Gene ID: 102631659, updated on 22-Oct-2024

Summary

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Official Symbol
Gm29942provided by MGI
Official Full Name
predicted gene, 29942provided by MGI
Primary source
MGI:MGI:5589101
See related
Ensembl:ENSMUSG00000084789 AllianceGenome:MGI:5589101
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 3.1) See more
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Genomic context

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See Gm29942 in Genome Data Viewer
Location:
4 D2.3; 4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (133502374..133508590)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (133775063..133781279)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_11644 Neighboring gene STARR-positive B cell enhancer ABC_E3524 Neighboring gene STARR-seq mESC enhancer starr_11646 Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class V Neighboring gene AT-rich interaction domain 1A Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:133262956-133263109 Neighboring gene microRNA 7227 Neighboring gene STARR-positive B cell enhancer ABC_E3525 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:133313458-133313641 Neighboring gene predicted gene, 30019 Neighboring gene predicted gene, 34296 Neighboring gene STARR-positive B cell enhancer ABC_E1284 Neighboring gene predicted gene, 25270 Neighboring gene STARR-seq mESC enhancer starr_11650 Neighboring gene predicted gene 12974

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    133502374..133508590
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_390816.4 RNA Sequence

  2. XR_390817.4 RNA Sequence

    Related
    ENSMUST00000342946.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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