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LINC01495 long intergenic non-protein coding RNA 1495 [ Homo sapiens (human) ]

Gene ID: 102723378, updated on 22-Oct-2024

Summary

Official Symbol
LINC01495provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1495provided by HGNC
Primary source
HGNC:HGNC:51161
See related
Ensembl:ENSG00000255323 AllianceGenome:HGNC:51161
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC01495 in Genome Data Viewer
Location:
11p14.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (22445672..22492019, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (22566375..22612750, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (22467218..22513565, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:22306158-22307357 Neighboring gene SLC17A6 divergent transcript Neighboring gene solute carrier family 17 member 6 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_20815 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_20847 Neighboring gene uncharacterized LOC105376588 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4533 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4534 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr11:22646933-22647832 Neighboring gene FA complementation group F

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_120583.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC055878, BG192115, BX092575
    Related
    ENST00000532380.3

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    22445672..22492019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    22566375..22612750 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)