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Gm39291 predicted gene, 39291 [ Mus musculus (house mouse) ]

Gene ID: 105243343, updated on 22-Oct-2024

Summary

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Official Symbol
Gm39291provided by MGI
Official Full Name
predicted gene, 39291provided by MGI
Primary source
MGI:MGI:5622176
See related
Ensembl:ENSMUSG00000139650 AllianceGenome:MGI:5622176
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in testis adult (RPKM 1.2), bladder adult (RPKM 0.5) and 15 other tissues See more
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Genomic context

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See Gm39291 in Genome Data Viewer
Location:
9 A1; 9
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (13648621..13660417, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (13737335..13749202, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene mastermind like transcriptional coactivator 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:13269708-13269915 Neighboring gene per-hexamer repeat gene 4 Neighboring gene STARR-seq mESC enhancer starr_23332 Neighboring gene STARR-seq mESC enhancer starr_23333 Neighboring gene STARR-seq mESC enhancer starr_23334 Neighboring gene STARR-seq mESC enhancer starr_23335 Neighboring gene predicted gene, 51666 Neighboring gene VISTA enhancer mm1371 Neighboring gene predicted gene, 53498 Neighboring gene STARR-seq mESC enhancer starr_23340 Neighboring gene myotubularin related protein 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:13631030-13631139 Neighboring gene STARR-positive B cell enhancer ABC_E3815 Neighboring gene STARR-positive B cell enhancer ABC_E363 Neighboring gene centrosomal protein 57 Neighboring gene family with sequence similarity 76, member B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    13648621..13660417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_870544.3 RNA Sequence

    Related
    ENSMUST00000354362.1

  2. XR_870545.4 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials