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Gm12958 predicted gene 12958 [ Mus musculus (house mouse) ]

Gene ID: 105244695, updated on 22-Oct-2024

Summary

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Official Symbol
Gm12958provided by MGI
Official Full Name
predicted gene 12958provided by MGI
Primary source
MGI:MGI:3652007
See related
Ensembl:ENSMUSG00000084891 AllianceGenome:MGI:3652007
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm12958 in Genome Data Viewer
Location:
4 D2.2; 4 62.1 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (128531149..128533013)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (128637358..128639220)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene zinc finger and SCAN domains 20 Neighboring gene STARR-positive B cell enhancer ABC_E839 Neighboring gene STARR-seq mESC enhancer starr_11454 Neighboring gene toll-like receptor 12 Neighboring gene STARR-seq mESC enhancer starr_11455 Neighboring gene STARR-positive B cell enhancer ABC_E9239 Neighboring gene polyhomeotic 2 Neighboring gene STARR-positive B cell enhancer ABC_E6219 Neighboring gene VISTA enhancer mm1684 Neighboring gene predicted gene, 33712 Neighboring gene STARR-seq mESC enhancer starr_11460 Neighboring gene STARR-positive B cell enhancer ABC_E9595 Neighboring gene alpha 1,3-galactosyltransferase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    128531149..128533013
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_868177.4 RNA Sequence

    Related
    ENSMUST00000141242.3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials