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LOC105369647 uncharacterized LOC105369647 [ Homo sapiens (human) ]

Gene ID: 105369647, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105369647
Gene description
uncharacterized LOC105369647
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 2.4), skin (RPKM 1.4) and 14 other tissues See more
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Genomic context

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See LOC105369647 in Genome Data Viewer
Location:
12p13.31
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (9408342..9408752)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (9391086..9391496)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101928030 Neighboring gene long intergenic non-protein coding RNA 2367 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:9531319-9531821 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:9555514-9556155 Neighboring gene ovostatin homolog 2 Neighboring gene uncharacterized LOC124902873 Neighboring gene DEAD/H-box helicase 12, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:9590133-9590632 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4227 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:9600631-9600851 Neighboring gene alpha-2-macroglobulin like 1 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4228 Neighboring gene RAN binding protein 6 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    9408342..9408752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001748996.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    9391086..9391496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007082797.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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