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LOC105369701 uncharacterized LOC105369701 [ Homo sapiens (human) ]

Gene ID: 105369701, updated on 17-Jun-2024

Summary

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Gene symbol
LOC105369701
Gene description
uncharacterized LOC105369701
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105369701 in Genome Data Viewer
Location:
12p12.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (25342604..25357942, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (25213808..25230515, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6115 Neighboring gene electron transfer flavoprotein regulatory factor 1 Neighboring gene uncharacterized LOC124902899 Neighboring gene KRAS proto-oncogene, GTPase Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_26705 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4293 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4294 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6116 Neighboring gene NFE2L2 motif-containing MPRA enhancer 301/302 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr12:25517951-25518546 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:25522046-25522546 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:25522547-25523047 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:25538426-25539295 Neighboring gene RNA, U4 small nuclear 67, pseudogene Neighboring gene ribosomal protein L39 pseudogene 27

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    25342604..25357942 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_931444.2 RNA Sequence

  2. XR_931445.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    25213808..25230515 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007083356.1 RNA Sequence

  2. XR_007083357.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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