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LOC105374192 uncharacterized LOC105374192 [ Homo sapiens (human) ]

Gene ID: 105374192, updated on 10-Dec-2024

Summary

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Gene symbol
LOC105374192
Gene description
uncharacterized LOC105374192
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105374192 in Genome Data Viewer
Location:
3q26.1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (165072027..165082037)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (167854948..167864986)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene NANOG hESC enhancer GRCh37_chr3:164448481-164448982 Neighboring gene long intergenic non-protein coding RNA 1324 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:164582212-164582862 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:164607970-164608470 Neighboring gene uncharacterized LOC107986050 Neighboring gene sucrase-isomaltase Neighboring gene long intergenic non-protein coding RNA 2023 Neighboring gene SLIT and NTRK like family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    165072027..165082037
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_924668.2 RNA Sequence

  2. XR_007096285.1 RNA Sequence

  3. XR_007096286.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    167854948..167864986
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007073255.1 RNA Sequence

  2. XR_007073256.1 RNA Sequence

  3. XR_007073257.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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