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MPPED2-AS1 MPPED2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 105376609, updated on 26-Oct-2024

Summary

Official Symbol
MPPED2-AS1provided by HGNC
Official Full Name
MPPED2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:53909
See related
AllianceGenome:HGNC:53909
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See MPPED2-AS1 in Genome Data Viewer
Location:
11p14.1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (30584150..30633328)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (30718405..30767591)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (30605697..30654875)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102723403 Neighboring gene ribosomal protein L12 pseudogene 30 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr11:30428692-30429242 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:30444450-30444950 Neighboring gene metallophosphoesterase domain containing 2 Neighboring gene NANOG hESC enhancer GRCh37_chr11:30466644-30467145 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr11:30567071-30568041 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr11:30568042-30569011 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3217 Neighboring gene long intergenic non-protein coding RNA 2859 Neighboring gene uncharacterized LOC101928338 Neighboring gene uncharacterized LOC107984419

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_183760.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL136088
  2. NR_183761.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL136088

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    30584150..30633328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    30718405..30767591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)