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LOC105867747 extracellular calcium-sensing receptor [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105867747, updated on 9-Nov-2023

Summary

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Gene symbol
LOC105867747
Gene description
extracellular calcium-sensing receptor
See related
Ensembl:ENSMICG00000031790
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Also known as
VN2R2
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Genomic context

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See LOC105867747 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 22 NC_033681.1 (5007613..5032048)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012204130.1 (399940..424381)

Chromosome 22 - NC_033681.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 135 Neighboring gene zinc finger and SCAN domain-containing protein 1 Neighboring gene uncharacterized LOC105867749 Neighboring gene cytochrome c-like Neighboring gene zinc finger protein 606

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. First evidence for functional vomeronasal 2 receptor genes in primates. Hohenbrink P, et al. Biol Lett, 2013 Feb 23. PMID 23269843, Free PMC Article
  2. Population genetics of mouse lemur vomeronasal receptors: current versus past selection and demographic inference. Hohenbrink P, et al. BMC Evol Biol, 2017 Jan 21. PMID 28109265, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular calcium-sensing receptor
Names
vomeronasal 2 receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001309953.1 → NP_001296882.1  extracellular calcium-sensing receptor

    See identical proteins and their annotated locations for NP_001296882.1

    Status: PROVISIONAL

    Source sequence(s)
    KC208007
    UniProtKB/TrEMBL
    A0A8C5XJC6, L0L793
    Related
    ENSMICP00000028605.1, ENSMICT00000027806.2
    Conserved Domains (4) summary
    pfam00003
    Location:536 → 761
    7tm_3; 7 transmembrane sweet-taste receptor of 3 GCPR
    pfam01094
    Location:5 → 400
    ANF_receptor; Receptor family ligand binding region
    pfam07562
    Location:441 → 492
    NCD3G; Nine Cysteines Domain of family 3 GPCR
    cl10011
    Location:10 → 431
    Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily

RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033681.1 Reference Mmur_3.0 Primary Assembly

    Range
    5007613..5032048
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012758099.1 → XP_012613553.1  extracellular calcium-sensing receptor isoform X1

    UniProtKB/TrEMBL
    A0A8B7FW28, A0A8C5XJC6
    Conserved Domains (4) summary
    pfam00003
    Location:565 → 790
    7tm_3; 7 transmembrane sweet-taste receptor of 3 GCPR
    pfam01094
    Location:34 → 429
    ANF_receptor; Receptor family ligand binding region
    pfam07562
    Location:470 → 521
    NCD3G; Nine Cysteines Domain of family 3 GPCR
    cl10011
    Location:39 → 460
    Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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