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RN7SL580P RNA, 7SL, cytoplasmic 580, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481081, updated on 17-Sep-2024

Summary

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Official Symbol
RN7SL580Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 580, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46596
See related
Ensembl:ENSG00000240641 AllianceGenome:HGNC:46596
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RN7SL580P in Genome Data Viewer
Location:
6p12.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (51975673..51975959)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (51812706..51812992)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (51840471..51840757)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101927082 Neighboring gene uncharacterized LOC124900615 Neighboring gene PKHD1 ciliary IPT domain containing fibrocystin/polyductin Neighboring gene uncharacterized LOC105375087 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:51608450-51608950 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:51608951-51609451 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:51719291-51719815 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:51719816-51720339 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:51739951-51740677 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:51739224-51739950 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:51846961-51847687 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:51888848-51890047 Neighboring gene uncharacterized LOC124901327 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:51941398-51941968 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:51941969-51942537 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:51961188-51962387 Neighboring gene microRNA 206

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044369.1 

    Range
    101..387
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    51975673..51975959
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    51812706..51812992
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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