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RNU4-14P RNA, U4 small nuclear 14, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481176, updated on 17-Sep-2024

Summary

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Official Symbol
RNU4-14Pprovided by HGNC
Official Full Name
RNA, U4 small nuclear 14, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46950
See related
Ensembl:ENSG00000222790 AllianceGenome:HGNC:46950
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU4-14P in Genome Data Viewer
Location:
5q31.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (140397323..140397444, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (140922758..140922879, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (139776908..139777029, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:139742660-139743205 Neighboring gene solute carrier family 4 member 9 Neighboring gene ANKHD1 divergent transcript Neighboring gene uncharacterized LOC124901087 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16449 Neighboring gene ANKHD1-EIF4EBP3 readthrough Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23269 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23270 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23271 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23272 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:139786226-139786726 Neighboring gene ankyrin repeat and KH domain containing 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:139805430-139805930 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:139805931-139806431 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:139808054-139808563 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:139812829-139813329 Neighboring gene uncharacterized LOC124901194 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23273 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:139926194-139926902 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:139926903-139927609 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:139927610-139928317 Neighboring gene eukaryotic translation initiation factor 4E binding protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043106.1 

    Range
    101..222
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    140397323..140397444 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    140922758..140922879 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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