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LOC107276214 UPF0481 protein At3g47200 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 107276214, updated on 12-Jul-2024

Summary

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Gene symbol
LOC107276214
Gene description
UPF0481 protein At3g47200
Locus tag
OSNPB_090540300
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC107276214 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (25708400..25709892, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (21265690..21267826, complement)

Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene acyl carrier protein 2, chloroplastic Neighboring gene uncharacterized LOC9266082 Neighboring gene GDSL esterase/lipase EXL3 Neighboring gene mediator of RNA polymerase II transcription subunit 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
UPF0481 protein At3g47200
Names
B1274F11.17
Os09g0540300

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

    Range
    25708400..25709892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026020109.2 → XP_025875894.1  UPF0481 protein At3g47200

    UniProtKB/TrEMBL
    A3C126
    Conserved Domains (1) summary
    pfam03140
    Location:52 → 469
    DUF247; Plant protein of unknown function
Nucleotide Protein
Heading Accession and Version

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