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LOC107276860 aspartic proteinase nepenthesin-1 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 107276860, updated on 12-Jul-2024

Summary

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Gene symbol
LOC107276860
Gene description
aspartic proteinase nepenthesin-1
Locus tag
OSNPB_010868600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC107276860 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (38270052..38271993)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (37641485..37643459)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene DNA polymerase alpha catalytic subunit-like Neighboring gene aspartic proteinase nepenthesin-2 Neighboring gene subtilisin-like protease SBT3 Neighboring gene subtilisin-like protease SBT3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartic proteinase nepenthesin-1
Names
Os01g0868600
P0677H08.22
putative aspartic proteinase nepenthesin I

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    38270052..38271993
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015778099.3 → XP_015633585.1  aspartic proteinase nepenthesin-1

    UniProtKB/TrEMBL
    A0A0P0VAY2, A0A9K3Y735, A2WXC9, Q8S1N5
    Conserved Domains (1) summary
    cd05476
    Location:99 → 433
    pepsin_A_like_plant; Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants
Nucleotide Protein
Heading Accession and Version

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