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LOC107277444 cadmium/zinc-transporting ATPase HMA3-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 107277444, updated on 1-Aug-2024

Summary

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Gene symbol
LOC107277444
Gene description
cadmium/zinc-transporting ATPase HMA3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC107277444 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (38289980..38291493, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (37661760..37663291, complement)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene subtilisin-like protease SBT3 Neighboring gene uncharacterized LOC4324926 Neighboring gene magnesium transporter MRS2-E-like Neighboring gene sister chromatid cohesion protein PDS5 homolog B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cadmium/zinc-transporting ATPase HMA3-like
Names
P0677H08.28
potential cadmium/zinc-transporting ATPase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    38289980..38291493 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066310163.1 → XP_066166260.1  cadmium/zinc-transporting ATPase HMA3-like

    UniProtKB/TrEMBL
    A0A0P0VAU5, A0A979HJN2, Q5N954
Nucleotide Protein
Heading Accession and Version

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