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LOC107984011 uncharacterized LOC107984011 [ Homo sapiens (human) ]

Gene ID: 107984011, updated on 17-Jun-2024

Summary

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Gene symbol
LOC107984011
Gene description
uncharacterized LOC107984011
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in heart (RPKM 1.1), kidney (RPKM 0.8) and 24 other tissues See more
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Genomic context

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See LOC107984011 in Genome Data Viewer
Location:
9q21.12
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (70601955..70608272)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (82770264..82775086)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376079 Neighboring gene KLF9 divergent transcript Neighboring gene KLF9-I enhancer Neighboring gene MPRA-validated peak7263 silencer Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:73215684-73216883 Neighboring gene RNA, 7SL, cytoplasmic 726, pseudogene Neighboring gene transient receptor potential cation channel subfamily M member 3 Neighboring gene uncharacterized LOC105376078 Neighboring gene microRNA 204

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    70601955..70608272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007061572.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    82770264..82775086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007080586.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases