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LOC107984379 uncharacterized LOC107984379 [ Homo sapiens (human) ]

Gene ID: 107984379, updated on 17-Jun-2024

Summary

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Gene symbol
LOC107984379
Gene description
uncharacterized LOC107984379
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107984379 in Genome Data Viewer
Location:
11q24.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (127229925..127231863)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (127262951..127264889)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101929473 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:126970468-126970708 Neighboring gene uncharacterized LOC105369562 Neighboring gene long intergenic non-protein coding RNA 2712 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:127180643-127181842 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:127190865-127191395 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_19685 Neighboring gene MPRA-validated peak1506 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:127262370-127262928 Neighboring gene RN7SK pseudogene 121

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    127229925..127231863
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001748080.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    127262951..127264889
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007081826.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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