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Gm13205 predicted gene 13205 [ Mus musculus (house mouse) ]

Gene ID: 108168987, updated on 17-Aug-2024

Summary

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Official Symbol
Gm13205provided by MGI
Official Full Name
predicted gene 13205provided by MGI
Primary source
MGI:MGI:3700976
See related
AllianceGenome:MGI:3700976
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in lung adult (RPKM 5.6), small intestine adult (RPKM 5.3) and 24 other tissues See more
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Genomic context

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See Gm13205 in Genome Data Viewer
Location:
4 78.87 cM; 4 E2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (149031946..149036779, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (148947489..148952322, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene castor zinc finger 1 Neighboring gene predicted gene, 42352 Neighboring gene STARR-seq mESC enhancer starr_12094 Neighboring gene STARR-seq mESC enhancer starr_12095 Neighboring gene predicted gene 15969 Neighboring gene predicted gene 17029 Neighboring gene VISTA enhancer mm1566 Neighboring gene peroxisomal biogenesis factor 14 Neighboring gene predicted gene, 42351

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray. Tanaka TS, et al. Proc Natl Acad Sci U S A, 2000 Aug 1. PMID 10922068, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_154553.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL607145, AL611967

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    149031946..149036779 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version