U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC109730287 uncharacterized LOC109730287 [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 109730287, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC109730287
Gene description
uncharacterized LOC109730287
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC109730287 in Genome Data Viewer
Location:
chromosome: X
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) X NC_033692.1 (69504460..69510055)

Chromosome X - NC_033692.1Genomic Context describing neighboring genes Neighboring gene proteasome subunit beta type-4 pseudogene Neighboring gene polycomb protein EED pseudogene Neighboring gene flap endonuclease 1-like Neighboring gene iduronate 2-sulfatase Neighboring gene endothelium and lymphocyte associated ASCH domain 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_033692.1 Chromosome X Reference Mmur_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA-DNA hybrid ribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aspartic-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in virion assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: uncharacterized protein LOC109730287

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033692.1 Reference Mmur_3.0 Primary Assembly

    Range
    69504460..69510055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020285225.1 → XP_020140814.1  LOW QUALITY PROTEIN: uncharacterized protein LOC109730287

    UniProtKB/TrEMBL
    A0A8B7WZY7
    Conserved Domains (6) summary
    cd06095
    Location:525 → 606
    RP_RTVL_H_like; Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements
    cd03715
    Location:688 → 903
    RT_ZFREV_like; A subfamily of reverse transcriptases (RTs) found in sequences similar to the intact endogenous retrovirus ZFERV from zebrafish and to Moloney murine leukemia virus RT. An RT gene is usually indicative of a mobile element such as a retrotransposon or ...
    cd09273
    Location:1153 → 1293
    RNase_HI_RT_Bel; Bel/Pao family of RNase HI in long-term repeat retroelements
    pfam01140
    Location:2 → 127
    Gag_MA; Matrix protein (MA), p15
    pfam02093
    Location:209 → 415
    Gag_p30; Gag P30 core shell protein
    cl07828
    Location:1360 → 1399
    zf-H2C2; His(2)-Cys(2) zinc finger
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases