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PuYmMV_gp5 replication-associated protein C1 [ Pumpkin yellow mosaic Malaysia virus ]

Gene ID: 10987397, updated on 16-Aug-2018

Summary

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Gene symbol
PuYmMV_gp5
Gene description
replication-associated protein C1
Locus tag
PuYmMV_gp5
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pumpkin yellow mosaic Malaysia virus (isolate: MP1)
Lineage
Viruses; ssDNA viruses; Geminiviridae; Begomovirus
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Genomic context

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Location:
segment: DNA A
Sequence:
NC_010946.1 (1497..2582, complement)

NC_010946.1Genomic Context describing neighboring genes Neighboring gene precoat protein Neighboring gene coat protein Neighboring gene C3 protein Neighboring gene C2 protein Neighboring gene C4 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010946.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
replication-associated protein C1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010946.1 Reference assembly

    Range
    1497..2582 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001974391.1 replication-associated protein C1 [Pumpkin yellow mosaic Malaysia virus]

    See identical proteins and their annotated locations for YP_001974391.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A3RDQ3
    Conserved Domains (2) summary
    pfam00799
    Location:7 → 119
    Gemini_AL1; Geminivirus Rep catalytic domain
    pfam08283
    Location:126 → 230
    Gemini_AL1_M; Geminivirus rep protein central domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases