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LOC112268015 uncharacterized LOC112268015 [ Homo sapiens (human) ]

Gene ID: 112268015, updated on 17-Sep-2024

Summary

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Gene symbol
LOC112268015
Gene description
uncharacterized LOC112268015
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC112268015 in Genome Data Viewer
Location:
8q21.3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (89616929..89629059, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene keratin 8 pseudogene 4 Neighboring gene LINE-1 retrotransposable element ORF2 protein-like Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:90547639-90548190 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27599 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr8:90623836-90625035 Neighboring gene NANOG hESC enhancer GRCh37_chr8:90737932-90738481 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19344 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27603 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:90749405-90749994 Neighboring gene palmitic acid regulated anti-inflammatory lncRNA Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19345 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27604 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27605 Neighboring gene MPRA-validated peak7102 silencer Neighboring gene receptor interacting serine/threonine kinase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000008.11 Chromosome 8 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    89616929..89629059 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002956661.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases