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LOC112268143 uncharacterized LOC112268143 [ Homo sapiens (human) ]

Gene ID: 112268143, updated on 27-Aug-2024

Summary

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Gene symbol
LOC112268143
Gene description
uncharacterized LOC112268143
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
15q25.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (78755964..78757745, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (76619389..76621170, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:79031801-79032780 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:79032781-79033760 Neighboring gene dynamin 1 pseudogene 37 Neighboring gene TBC1 domain family member 2B pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:79048664-79049468 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:79049469-79050273 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 7 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:79059419-79059996 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:79061151-79061726 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:79066205-79066706 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_40965 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6715 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_41019 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_41025 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6716 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:79123741-79124288 Neighboring gene relaxin family peptide receptor 3 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    78755964..78757745 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002957697.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    76619389..76621170 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007085744.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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