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LOC112327167 ABC transporter B family member 25 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 112327167, updated on 6-Jun-2024

Summary

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Gene symbol
LOC112327167
Gene description
ABC transporter B family member 25
Locus tag
POPTR_015G059600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC112327167 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
51
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 15 NC_037299.2 (8289775..8354633, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 4 NC_037288.1 (18287521..18289921, complement)

Chromosome 15 - NC_037299.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127904398 Neighboring gene tip elongation aberrant protein 1 Neighboring gene uncharacterized LOC112327349 Neighboring gene glutathione S-transferase T3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type oligopeptide transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ABC transporter B family member 25

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037299.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    8289775..8354633 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052447588.1 → XP_052303548.1  ABC transporter B family member 25 isoform X8

    UniProtKB/TrEMBL
    A0A2K1XIN5

  2. XM_052447587.1 → XP_052303547.1  ABC transporter B family member 25 isoform X6

    UniProtKB/TrEMBL
    A0A2K1XIN5

  3. XM_052447589.1 → XP_052303549.1  ABC transporter B family member 25 isoform X9

    UniProtKB/TrEMBL
    A0A2K1XIP8

  4. XM_006374362.3 → XP_006374424.3  ABC transporter B family member 25 isoform X7

    UniProtKB/TrEMBL
    A0A2K1XIN5

  5. XM_052447590.1 → XP_052303550.1  ABC transporter B family member 25 isoform X10

    UniProtKB/TrEMBL
    A0A2K1XIP8

  6. XM_052447585.1 → XP_052303545.1  ABC transporter B family member 25 isoform X4

    UniProtKB/TrEMBL
    A0A2K1XIP8

  7. XM_052447583.1 → XP_052303543.1  ABC transporter B family member 25 isoform X2

    UniProtKB/TrEMBL
    A0A2K1XIP8

  8. XM_052447584.1 → XP_052303544.1  ABC transporter B family member 25 isoform X3

    UniProtKB/TrEMBL
    A0A2K1XIP8

  9. XM_052447582.1 → XP_052303542.1  ABC transporter B family member 25 isoform X1

    UniProtKB/TrEMBL
    A0A2K1XIN5

  10. XM_052447586.1 → XP_052303546.1  ABC transporter B family member 25 isoform X5

    UniProtKB/TrEMBL
    A0A2K1XIN5
Nucleotide Protein
Heading Accession and Version

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