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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001331158.2 → NP_001318087.1 trans-3-hydroxy-L-proline dehydratase isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and coding sequnce compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 2 and 3 both encode the same isoform (b).
- Source sequence(s)
-
AL159140
- Conserved Domains (1) summary
-
- cl27019
Location:1 → 181
- Pro_racemase; Proline racemase
-
NM_001331159.1 → NP_001318088.1 trans-3-hydroxy-L-proline dehydratase isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and coding sequnce compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 2 and 3 both encode the same isoform (b).
- Source sequence(s)
-
AL159140
- Conserved Domains (1) summary
-
- cl27019
Location:1 → 181
- Pro_racemase; Proline racemase
-
NM_001331164.2 → NP_001318093.1 trans-3-hydroxy-L-proline dehydratase isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 3' UTR and coding sequence compared to variant 1. The resulting isoform (c) has a shorter and distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AL159140
-
NM_144581.2 → NP_653182.1 trans-3-hydroxy-L-proline dehydratase isoform a
See identical proteins and their annotated locations for NP_653182.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a).
- Source sequence(s)
-
AK058165, AL159140
- Consensus CDS
-
CCDS9739.1
- UniProtKB/Swiss-Prot
- Q96EM0, Q96LJ5
- Related
- ENSP00000247194.4, ENST00000247194.9
- Conserved Domains (2) summary
-
- PRK13970
Location:20 → 347
- PRK13970; hydroxyproline-2-epimerase; Provisional
- pfam05544
Location:22 → 352
- Pro_racemase; Proline racemase
RNA
-
NR_138571.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) uses two alternate splice junctions compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL159140
-
NR_138572.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) uses an alternate splice junction compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL159140
-
NR_138574.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) uses an alternate splice junction compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL159140
-
NR_138575.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) uses an alternate splice junction and retains an intron compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL159140