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TRNAC-GCA transfer RNA cysteine (anticodon GCA) [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 112938938, updated on 12-Jul-2024

Summary

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Gene symbol
TRNAC-GCA
Gene description
transfer RNA cysteine (anticodon GCA)
Gene type
tRNA
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Summary
This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
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Genomic context

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See TRNAC-GCA in Genome Data Viewer
Location:
chromosome: 4
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (20774385..20774456, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (20390384..20390455, complement)

Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene glucan endo-1,3-beta-glucosidase 14 Neighboring gene uncharacterized LOC9271244 Neighboring gene alpha carbonic anhydrase 1, chloroplastic Neighboring gene uncharacterized LOC4335784 Neighboring gene uncharacterized LOC4335785

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

    Range
    20774385..20774456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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