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TRNAM-CAU transfer RNA methionine (anticodon CAU) [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 112939538, updated on 12-Jul-2024

Summary

Gene symbol
TRNAM-CAU
Gene description
transfer RNA methionine (anticodon CAU)
Gene type
tRNA
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Summary
This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
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Genomic context

See TRNAM-CAU in Genome Data Viewer
Location:
chromosome: 6
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (9519697..9519768)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (9343720..9343791)

Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene peroxidase 11 Neighboring gene zinc finger protein HD1-like Neighboring gene histone-lysine N-methyltransferase CLF-like Neighboring gene transcription factor bHLH49

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

    Range
    9519697..9519768
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)