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Rdl Resistant to dieldrin [ Ctenocephalides felis (cat flea) ]

Gene ID: 113378428, updated on 23-May-2024

Summary

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Gene symbol
Rdl
Gene description
Resistant to dieldrin
See related
EnsemblRapid:LOC113378428
Gene type
protein coding
RefSeq status
MODEL
Organism
Ctenocephalides felis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Siphonaptera; Pulicidae; Archaeopsyllinae; Ctenocephalides
Orthologs
fruit fly all
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Genomic context

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See Rdl in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM342690v1 (GCF_003426905.1) Unplaced Scaffold NW_020538040.1 (95524071..95692246)

NW_020538040.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113378429 Neighboring gene ras-related and estrogen-regulated growth inhibitor Neighboring gene glutamate receptor 1-like Neighboring gene bifunctional transcriptional activator/DNA repair enzyme Ada Neighboring gene Actin-related protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020538040 Unplaced Scaffold Reference ASM342690v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The novel isoxazoline ectoparasiticide fluralaner: selective inhibition of arthropod γ-aminobutyric acid- and L-glutamate-gated chloride channels and insecticidal/acaricidal activity. Gassel M, et al. Insect Biochem Mol Biol, 2014 Feb. PMID 24365472
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GABA-A receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular ligand-gated monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-aminobutyric acid receptor subunit beta
Names
GABA-gated chloride channel rdl-A285
GABA-gated chloride channel rdl-S285

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ctenocephalides felis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342690v1

Genomic

  1. NW_020538040.1 Reference ASM342690v1

    Range
    95524071..95692246
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026618958.1 → XP_026474743.1  gamma-aminobutyric acid receptor subunit beta isoform X1

    UniProtKB/TrEMBL
    V9ZCF2
    Related
    XP_026474743.1, XM_026618958.1
    Conserved Domains (1) summary
    cl27321
    Location:45 → 465
    Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain

  2. XM_026618959.1 → XP_026474744.1  gamma-aminobutyric acid receptor subunit beta isoform X2

    UniProtKB/TrEMBL
    V9ZCF2
    Related
    XP_026474744.1, XM_026618959.1
    Conserved Domains (1) summary
    cl27321
    Location:9 → 428
    Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
Nucleotide Protein
Heading Accession and Version

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