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SCBaV_gp1 ORF1 protein [ Sugarcane bacilliform Guadeloupe D virus ]

Gene ID: 11493295, updated on 17-Aug-2018

Summary

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Gene symbol
SCBaV_gp1
Gene description
ORF1 protein
Locus tag
SCBaV_gp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sugarcane bacilliform Guadeloupe D virus (isolate: BataviaD, nat-host: sugarcane cultivar Batavia)
Lineage
Viruses; Retro-transcribing viruses; Caulimoviridae; Badnavirus
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Genomic context

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Sequence:
NC_013455.1 (536..1066)

NC_013455.1Genomic Context describing neighboring genes Neighboring gene ORF2 protein Neighboring gene ORF3 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013455.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High molecular variability of sugarcane bacilliform viruses in Guadeloupe implying the existence of at least three new species. Muller E, et al. Virus Res, 2011 Sep. PMID 21741419

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ORF1 protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013455.1 Reference assembly

    Range
    536..1066
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003284235.1 ORF1 protein [Sugarcane bacilliform Guadeloupe D virus]

    See identical proteins and their annotated locations for YP_003284235.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D0QEI7
    Conserved Domains (1) summary
    pfam07028
    Location:25 → 162
    DUF1319; Protein of unknown function (DUF1319)
Nucleotide Protein
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