U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC115253273 E3 ubiquitin/ISG15 ligase TRIM25-like [ Takifugu rubripes (torafugu) ]

Gene ID: 115253273, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC115253273
Gene description
E3 ubiquitin/ISG15 ligase TRIM25-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC115253273 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 1 NC_042285.1 (730908..732499)

Chromosome 1 - NC_042285.1Genomic Context describing neighboring genes Neighboring gene NACHT, LRR and PYD domains-containing protein 3-like Neighboring gene calcium/calmodulin-dependent protein kinase type II subunit gamma-like Neighboring gene neurotrypsin-like Neighboring gene cerebellar degeneration-related protein 2-like Neighboring gene polymerase (RNA) III (DNA directed) polypeptide E

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_042285.1 Chromosome 1 Reference fTakRub1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
E3 ubiquitin/ISG15 ligase TRIM25-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042285.1 Reference fTakRub1.2 Primary Assembly

    Range
    730908..732499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029850763.1 → XP_029706623.1  E3 ubiquitin/ISG15 ligase TRIM25-like

    Conserved Domains (4) summary
    pfam15921
    Location:194 → 315
    CCDC158; Coiled-coil domain-containing protein 158
    cd00162
    Location:15 → 54
    RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
    cl00034
    Location:102 → 150
    Bbox_SF; B-box-type zinc finger superfamily
    cl17238
    Location:12 → 55
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases