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Prosalpha1 Proteasome alpha1 subunit [ Scaptodrosophila lebanonensis ]

Gene ID: 115634812, updated on 23-May-2024

Summary

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Gene symbol
Prosalpha1
Gene description
Proteasome alpha1 subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Scaptodrosophila lebanonensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Scaptodrosophila
Orthologs
fruit fly all
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Genomic context

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See Prosalpha1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current SlebRS2 (GCF_003285725.1) Unplaced Scaffold NW_022060529.1 (13621722..13622868)

NW_022060529.1Genomic Context describing neighboring genes Neighboring gene diacyl glycerol kinase 1 Neighboring gene ubiquitin-like-conjugating enzyme ATG10 Neighboring gene tRNA (adenine(37)-N6)-methyltransferase Neighboring gene syntaxin-10 Neighboring gene phospholipid scramblase 3 Neighboring gene uncharacterized LOC115619944 Neighboring gene deoxyribodipyrimidine photo-lyase photorepair

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022060529 Unplaced Scaffold Reference SlebRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex, alpha-subunit complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome subunit alpha type-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scaptodrosophila lebanonensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SlebRS2

Genomic

  1. NW_022060529.1 Reference SlebRS2

    Range
    13621722..13622868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030532728.1 → XP_030388588.1  proteasome subunit alpha type-6

    UniProtKB/TrEMBL
    A0A6J2UME9
    Conserved Domains (1) summary
    cd03754
    Location:8 → 218
    proteasome_alpha_type_6; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...
Nucleotide Protein
Heading Accession and Version

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