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LOC116655870 selenoprotein F [ Drosophila ananassae ]

Gene ID: 116655870, updated on 10-May-2024

Summary

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Gene symbol
LOC116655870
Gene description
selenoprotein F
Locus tag
Dana_GF13902
See related
EnsemblRapid:LOC116655870
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila ananassae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GF13902; GF13902-PA
Orthologs
fruit fly all
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Genomic context

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See LOC116655870 in Genome Data Viewer
Location:
chromosome: 2R
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM1763931v2 (GCF_017639315.1) 2R NC_057928.1 (12622970..12632712, complement)
101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473439.1 (14425762..14428655)

Chromosome 2R - NC_057928.1Genomic Context describing neighboring genes Neighboring gene cellular communication network factor protein Ccn Neighboring gene phospholipid-transporting ATPase ABCA3 Neighboring gene uncharacterized LOC6493414 Neighboring gene CREB-regulated transcription coactivator Neighboring gene protein spitz Neighboring gene Nedd4 family interacting protein Neighboring gene Protein on ecdysone puffs

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
selenoprotein F; uncharacterized protein LOC116655870
Names
Dana\GF13902
Dana\GF13902-PA
dana_GLEANR_14002

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1763931v2

Genomic

  1. NC_057928.1 Reference ASM1763931v2

    Range
    12622970..12632712 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044714782.1 → XP_044570717.1  selenoprotein F isoform X5

    Related
    XP_044570717.1, XM_044714782.1

  2. XM_044714779.1 → XP_044570714.1  uncharacterized protein LOC116655870 isoform X1

    UniProtKB/TrEMBL
    B3M4T2
    Related
    XP_044570714.1, XM_044714779.1

  3. XM_044714780.1 → XP_044570715.1  uncharacterized protein LOC116655870 isoform X3

    UniProtKB/TrEMBL
    B3M154
    Related
    XP_044570715.1, XM_044714780.1

  4. XM_032454619.2 → XP_032310510.1  uncharacterized protein LOC116655870 isoform X2

    UniProtKB/TrEMBL
    B3M4T2
    Related
    XP_032310510.1, XM_032454619.2

  5. XM_032454618.2 → XP_032310509.1  uncharacterized protein LOC116655870 isoform X1

    UniProtKB/TrEMBL
    B3M4T2
    Related
    XP_032310509.1, XM_032454618.2

  6. XM_032454620.2 → XP_032310511.1  uncharacterized protein LOC116655870 isoform X3

    UniProtKB/TrEMBL
    B3M154
    Related
    XP_032310511.1, XM_032454620.2

  7. XM_044714781.1 → XP_044570716.1  selenoprotein F isoform X4

    UniProtKB/TrEMBL
    B3N2M8
    Related
    XP_044570716.1, XM_044714781.1
    Conserved Domains (1) summary
    pfam08806
    Location:74 → 148
    Sep15_SelM; Sep15/SelM redox domain
Nucleotide Protein Strain
Heading Accession and Version

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