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LOC116840197 serine/arginine repetitive matrix protein 2-like [ Chelonoidis abingdonii (Abingdon island giant tortoise) ]

Gene ID: 116840197, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116840197
Gene description
serine/arginine repetitive matrix protein 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonoidis abingdonii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Chelonoidis
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Genomic context

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See LOC116840197 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM359739v1 (GCF_003597395.1) Unplaced Scaffold NW_022646863.1 (429451..449231)

NW_022646863.1Genomic Context describing neighboring genes Neighboring gene claudin-9-like Neighboring gene claudin-4-like Neighboring gene elongin B Neighboring gene uncharacterized LOC116840185

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022646863 Unplaced Scaffold Reference ASM359739v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonoidis abingdonii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM359739v1

Genomic

  1. NW_022646863.1 Reference ASM359739v1

    Range
    429451..449231
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032806649.1 → XP_032662540.1  LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 2-like

    Conserved Domains (4) summary
    PHA03247
    Location:1455 → 1798
    PHA03247; large tegument protein UL36; Provisional
    PHA03307
    Location:263 → 542
    PHA03307; transcriptional regulator ICP4; Provisional
    PTZ00108
    Location:1021 → 1244
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    TIGR01622
    Location:499 → 601
    SF-CC1; splicing factor, CC1-like family
Nucleotide Protein
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