U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SKOR2 SKI family transcriptional corepressor 2 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117038751, updated on 30-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SKOR2
Gene description
SKI family transcriptional corepressor 2
See related
EnsemblRapid:ENSRFEG00010013793
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SKOR2 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 19 NC_046302.1 (38764831..38815281, complement)

Chromosome 19 - NC_046302.1Genomic Context describing neighboring genes Neighboring gene haloacid dehalogenase like hydrolase domain containing 2 Neighboring gene immediate early response 3 interacting protein 1 Neighboring gene SMAD family member 2 Neighboring gene zinc finger and BTB domain containing 7C Neighboring gene developmental pluripotency-associated protein 2-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_046302.1 Chromosome 19 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SMAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
SKI family transcriptional corepressor 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046302.1 Reference mRhiFer1_v1.p

    Range
    38764831..38815281 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033135660.1 → XP_032991551.1  SKI family transcriptional corepressor 2

    UniProtKB/TrEMBL
    A0A671F4Z1, A0A7J7TR27
    Conserved Domains (2) summary
    cd21080
    Location:41 → 131
    DHD_Skor; Dachshund-homology domain found in SKI family transcriptional corepressors, Skor1, Skor2 and similar proteins
    cl07406
    Location:144 → 236
    c-SKI_SMAD_bind; c-SKI Smad4 binding domain

  2. XM_033135661.1 → XP_032991552.1  SKI family transcriptional corepressor 2

    UniProtKB/TrEMBL
    A0A671F4Z1, A0A7J7TR27
    Related
    ENSRFEP00010020619.1, ENSRFET00010022464.2
    Conserved Domains (2) summary
    cd21080
    Location:41 → 131
    DHD_Skor; Dachshund-homology domain found in SKI family transcriptional corepressors, Skor1, Skor2 and similar proteins
    cl07406
    Location:144 → 236
    c-SKI_SMAD_bind; c-SKI Smad4 binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.